The Isogenie Database Project

Welcome to the IsoGenie Database (IsoGenieDB), a cross-disciplinary database designed to store the data generated and analyzed by the IsoGenie Project. The goal of the IsoGenie Project is to discover how microbial communities mediate the fate of carbon in thawing permafrost landscapes under climate change. For general information about the IsoGenie Project, please see our overview site.

The IsoGenieDB is a Neo4j graph database that integrates its data in a queryable framework. The code used for importing data into the IsoGenieDB is open source, and is available on our Bitbucket page.

For a detailed overview of the database and its capabilities, please see the following manuscript:

Bolduc, B., Hodgkins, S. B., Varner, R. K., Crill, P. M., McCalley, C. K., Chanton, J. P., Tyson, G. W., Riley, W. J., Palace, M., Duhaime, M. B., Hough, M. A., IsoGenie Project Coordinators, IsoGenie Project Team, A2A Project Team, Saleska, S. R., Sullivan, M. B., & Rich, V. I. (2020). The IsoGenie database: an interdisciplinary data management solution for ecosystems biology and environmental research. PeerJ, 8, e9467.

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